design: Accessors for the 'design' slot of a IsomirDataSeq object.
In lpantano/isomiRs: Analyze isomiRs and miRNAs from small RNA-seq
design R Documentation
Accessors for the 'design' slot of a IsomirDataSeq object.
Description
The design holds the R formula which expresses how the
counts depend on the variables in colData.
See IsomirDataSeq for details.
Usage
## S4 method for signature 'IsomirDataSeq'
design(object)
## S4 replacement method for signature 'IsomirDataSeq,formula'
design(object) <- value
Arguments
object
A IsomirDataSeq object.
value
A formula to pass to DESeq2.
Value
design for the experiment
Examples
data(mirData)
design(mirData) <- formula(~ 1)
lpantano/isomiRs documentation built on Aug. 26, 2024, 3:34 a.m.
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| design | R Documentation |
Accessors for the 'design' slot of a IsomirDataSeq object.
Description
The design holds the R formula which expresses how the
counts depend on the variables in colData.
See IsomirDataSeq for details.
Usage
## S4 method for signature 'IsomirDataSeq'
design(object)
## S4 replacement method for signature 'IsomirDataSeq,formula'
design(object) <- value
Arguments
object |
A IsomirDataSeq object. |
value |
A formula to pass to DESeq2. |
Value
design for the experiment
Examples
data(mirData)
design(mirData) <- formula(~ 1)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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