isoAnnotate: Annotate the rawData of the IsomirDataSeq object
In lpantano/isomiRs: Analyze isomiRs and miRNAs from small RNA-seq
isoAnnotate R Documentation
Annotate the rawData of the IsomirDataSeq object
Description
Get the sequence and the name information for each isomiR,
and the importance value (isomir_reads/mirna_reads) for
each sample.
Usage
isoAnnotate(ids)
Arguments
ids
Object of class IsomirDataSeq.
Details
edit_mature_position represents the position at the mature
sequence + nucleotide at reference + nucleotide at isomiR.
Value
data.frame with the sequence, isomir name,
and importance for each sample and isomiR.
Examples
data(mirData)
head(isoAnnotate(mirData))
lpantano/isomiRs documentation built on May 4, 2024, 6:50 p.m.
R Package Documentation
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| isoAnnotate | R Documentation |
Annotate the rawData of the IsomirDataSeq object
Description
Get the sequence and the name information for each isomiR,
and the importance value (isomir_reads/mirna_reads) for
each sample.
Usage
isoAnnotate(ids)
Arguments
ids |
Object of class IsomirDataSeq. |
Details
edit_mature_position represents the position at the mature
sequence + nucleotide at reference + nucleotide at isomiR.
Value
data.frame with the sequence, isomir name, and importance for each sample and isomiR.
Examples
data(mirData)
head(isoAnnotate(mirData))
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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