isoTop: Heatmap of the top expressed isomiRs

View source: R/isomiRs.R

isoTopR Documentation

Heatmap of the top expressed isomiRs

Description

This function creates a heatmap with the top N isomiRs/miRNAs. It uses the matrix under counts(ids) to get the top expressed isomiRs/miRNAs using the average expression value and plot a heatmap with the raw counts for each sample.

Usage

isoTop(ids, top = 20, condition = NULL)

Arguments

ids

Object of class IsomirDataSeq.

top

Number of isomiRs/miRNAs used.

condition

Give condition to color PCA samples

Value

PCA of the top expressed miRNAs

Examples

data(mirData)
isoTop(mirData)

lpantano/isomiRs documentation built on Aug. 26, 2024, 3:34 a.m.