SeuratPie: Make small-multiple pie charts.

In maehrlab/thymusatlastools: Tools for analysis of single-cell transcriptomic data

Description

Make small-multiple pie charts.

Usage

SeuratPie(dge, ident.use = "cell_type", facet_by = "eday",
  do.test = FetchDataZeroPad(dge, "eday")[[1]] %>% unique %>% length %>%
  is_greater_than(1), col = NULL, label = F,
  main = "Sample makeup by day", drop_levels = F)

Arguments

dge	Seurat object
ident.use	Becomes the categories in the pie chart
facet_by	Each small multiple contains cases at one level of this variable.
col	Optional colorscale.
label	Logical. If TRUE, percentages are added.
main	Plot title.
drop_levels	If TRUE, omit facets that would be empty.

maehrlab/thymusatlastools documentation built on May 28, 2019, 2:32 a.m.