PlotLRRAndCNVs: PlotLRRAndCNVs

Description Usage Arguments Details Value Author(s) Source Examples

Description

PlotLRRAndCNVs: Plot Log R Ratio (LRR) and copy number variations (CNVs) for the whole mock sample.

Usage

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PlotLRRAndCNVs(CNV, Sample = MockData, CNVMean = 0.3, Name = "Test.png",
  Roi = RoiSingleMock, width = 12, height = 5, dpi = 100, PNG = TRUE,
  WindowSize = 35)

Arguments

CNV:

Copy Number Variation, default = Unknown.

Sample:

Unknown, default = MockData.

CNVMean:

Unknown, default = Unknown.

Name:

Unknown, default = Unknown.

Roi:

Region of Interest or hotspot, default = Unknown.

Width:

Unknown, default = 12.

Height:

Unknown, default = 5.

Dpi:

Dots per inch, default = 100.

PNG:

Portable Network Graphics, default = TRUE.

Details

Specifically designed to handle noisy data from amplified DNA on phenylketonuria (PKU) cards. The function is a pipeline using many subfunctions.

Value

Classification for LRR.

Author(s)

Marcelo Bertalan, Louise K. Hoeffding.

Source

http://biopsych.dk/iPsychCNV

Examples

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Unknown.

mbertalan/iPsychCNV documentation built on May 22, 2019, 12:19 p.m.