MakeLongMockSample: MakeLongMockSample
In mbertalan/iPsychCNV: iPsychCNV

Description Usage Arguments Details Value Author(s) Source Examples

MakeLongMockSample: Unknown

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MakeLongMockSample(Heterozygosity = 0.2, CNVDistance = 1000, Type = c(0,
  1, 2, 3, 4), Mean = c(-1, -0.45, 0, 0.3, 0.75), Size = 300, ChrMean = 0,
  ChrSD = 0.18)

`Heterozygosity:`	Percentage of BAF around 0.5.
`CNVDistance:`	Distance among CNVs, defualt = 1000.
`Type:`	Unknown, default = Unknown.
`Mean:`	Unknown, default = Unknown.
`Size:`	Unknown, default = Unknown.
`ChrMean:`	Unknown, default = 0.
`ChrSD:`	Unknown, default = 0.18.

Specifically designed to handle noisy data from amplified DNA on phenylketonuria (PKU) cards. The function is a pipeline using many subfunctions.

Data frame with predicted CNVs.

Marcelo Bertalan, Louise K. Hoeffding.

http://biopsych.dk/iPsychCNV

Sample <- MakeLongMockSample(CNVDistance=1000, Type=c(0,1,2,3,4), Mean=c(-0.9, -0.8, -0.7, -0.6, -0.5, -0.4, -0.3, -0.2, 0.2, 0.3, 0.4, 0.5, 0.6, 0.7, 0.8, 0.9), Size=c(100, 200, 300, 400, 500, 600, 700, 800, 900, 1000), ChrMean=0, ChrSD=0.18)