coal_check: Predictive check for coalescent model

In mdkarcher/phylodyn: Statistical Tools for Phylodynamics

Description

Predictive check for coalescent model

Usage

coal_check(coal_times, samp_times, n_sampled, logpop, grid)

Arguments

coal_times	numeric vector of coalescent times.
samp_times	numeric vector of sampling times.
n_sampled	integer vector of lineages sampled at each sampling time.
logpop	numeric vector of log-effective population sizes.
grid	numeric grid of time points.

Value

named numeric vector: "obs" contains the KS discrepancy for the supplied coalescent times, "rep" contains å KS discrepancy for the replicated coalescent times.

mdkarcher/phylodyn documentation built on Nov. 24, 2021, 12:20 a.m.