get_mddnam: Get DNAm-based metadata
In metamaden/rmpipeline: Process DNAm array IDATs into database files
View source: R/snakemake_functions.R
get_mddnam R Documentation
Get DNAm-based metadata
Description
Gets DNAm-based metadata, including model-based predictions and quality
metrics.
Usage
get_mddnam(
files.dname = "recount-methylation-files",
md.dname = "metadata",
comp.dname = "compilations"
)
Arguments
files.dname
Files dir name for instance ("recount-methylation-files")
md.dname
Metadata dir name ("metadata"), contained at files.dname.
comp.dname
Compilations dir name ("compilations"), contained at
files.dname.
Value
NULL, stores new DNAm-based metadata file at md.dpath.
metamaden/rmpipeline documentation built on Jan. 12, 2023, 3:20 p.m.
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View source: R/snakemake_functions.R
| get_mddnam | R Documentation |
Get DNAm-based metadata
Description
Gets DNAm-based metadata, including model-based predictions and quality metrics.
Usage
get_mddnam( files.dname = "recount-methylation-files", md.dname = "metadata", comp.dname = "compilations" )
Arguments
files.dname |
Files dir name for instance ("recount-methylation-files") |
md.dname |
Metadata dir name ("metadata"), contained at files.dname. |
comp.dname |
Compilations dir name ("compilations"), contained at files.dname. |
Value
NULL, stores new DNAm-based metadata file at md.dpath.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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