h5_add_tables: Add red or green signal data tables to an HDF5 database.

In metamaden/rmpipeline: Process DNAm array IDATs into database files

Add red or green signal data tables to an HDF5 database.

Description

Add red or green signal data tables to an HDF5 database.

Usage

h5_add_tables(dsn, fnl, platform, fnpath, dbn, ngsm.block, verbose)

Arguments

dsn	Name of new signal data table.
fnl	Vector of signal tables containing data to be added.
platform	DNAm array platform for instance.
fnpath	Path to dir containing files in fnl.
dbn	Database path to write data.
ngsm.block	Number of GSMs (samples) per process block (default 50)
verbose	Whether to show verbose status updates (TRUE).

Value

Populates a new HDF5 database with red or green signal data.

See Also

make_h5db_rg

metamaden/rmpipeline documentation built on Jan. 12, 2023, 3:20 p.m.