get_mvnhes Function to generate mvn from var and corr of log (F/Fmsy) and log(SSB/SSBmsy) extracted from the hessian. Author: Felipe Carvalho
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rootdir |
home directory |
mq_csv |
optional; if you already generated a MQ csv using extractResults it will read from that, otherwise need pattern/subpattern |
axes.limits |
x and y maximums for kobe plot, default to 2 |
kobe.type |
if 'ISC', will have pale orange coloring in place of orange/yellow |
b.name |
the character column name of the biomass ref point; can rename to change y lab |
f.name |
the character column name of the fishing ref point |
pattern |
1st order directory character |
subpattern |
2nd order directory character |
saveplot |
logical, do you want to save the plot |
plotloc |
where to save plot |
doLegend |
logical. do you want to write a legend (not advised for huge rep sets) |
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