makeDecTable: makeDecTable

In mkapur/kaputils: Utilities for Stock Assessment Simulation and Data Analysis

Description

makeDecTable given a directory or set of directories, will stitch together info for decision table of 3x3 dimensions

Usage

makeDecTable(
  rootdir,
  state_names = c("low", "base", "high"),
  catch_names = c("constant", "ABC", "upper"),
  years,
  baseCatch,
  row1Catch,
  row3Catch,
  round = T,
  writeTable = F,
  writeloc = getwd()
)

Arguments

rootdir	a master folder with all nine executed models.
state_names	three names referring to the states of nature, which must match names of the directories. defaults to low/base/high
catch_names	three names referring to the catch scenarios, which must match names of the directories. defaults to constant/ABC/upper
years	a vector of years for which you'd like output
baseCatch	a vector of catch values used for the base case model(s) (center row) – must match length(years)
row1Catch	a vector of catch values used for the first row model(s) (typically constant or lower stream)
row3Catch	a vector of catch values used for the first row model(s) (typically constant or lower stream)
round	logical, defaults to TRUE
writeTable	logical, defaults to FALSE
writeloc	if writeTable == T, directory to write output

mkapur/kaputils documentation built on Nov. 14, 2021, 3:23 a.m.