populate_cds: Popluate a Monocle3 cell data set from cell features
In momeara/MPStats: Tools for analyzing Morphological Profiling data

populate_cds

R Documentation

Popluate a Monocle3 cell data set from cell features

The Monocle3 cell data set is a container

populate_cds(
  cell_features,
  cell_feature_columns,
  cell_metadata_columns,
  embedding_type = c("UMAP"),
  embedding = NULL,
  verbose = FALSE
)

`cell_features`	data.frame: rows: cells, columns: features
`cell_metadata_columns`	data.frame: rows: features, columns feature metadata Note that there must be a column named 'feature'
`cell_metadata`	rows: cells, columns cell metadata

momeara/MPStats documentation built on July 19, 2022, 3:34 p.m.

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