read_compound_moa: Read compound mechanism of action table

In momeara/MPStats: Tools for analyzing Morphological Profiling data

Read compound mechanism of action table

Description

Read compound mechanism of action table

Usage

read_compound_moa(input)

Arguments

input

path to compound mechanism of action csv, (e.g. AGM_moa.csv) or data.frame with columns compound : chr # name of compound concentration : num # moa : chr # detailed mechanism of action moa2 : chr # class of mechanism of action

Value

compound_moa tibble::tibble with columns Classes 'spec_tbl_df', 'tbl_df', 'tbl' and 'data.frame': 40 obs. of 3 variables: $ compound : chr "PP-2" "emetine" "AZ258" "cytochalasin B" ... $ concentration : num 3 0.3 1 10 3 0.01 0.3 3 0.3 0.3 ... $ moa : chr "Epithelial" "Protein synthesis" "Aurora kinase inhibitors" "Actin disruptors" ... $ moa2 : chr "other" "other" "other" "cytoskeleton" ...

momeara/MPStats documentation built on July 19, 2022, 3:34 p.m.