R0_recurrence_seroprev_whole: function to calculate seroprevalence everywhere by recurrence...

In mrc-ide/YFestimation: Estimate ecological niche and two transmission models for yellow fever in Africa.

Description

function to calculate seroprevalence everywhere by recurrence relation in R0 model

Usage

R0_recurrence_seroprev_whole(adm, dat, R0, t0_vac_adm, dim_year, dim_age,
  p_prop_3d, P_tot_2d, inc_v3d, pop_moments_whole, vac_eff_arg)

Arguments

adm	admin 1 unit of interest
dat	environmental and occurrence data
R0	value of R0 for survey
t0_vac_adm	time of vaccination for admin, scalar
dim_year	years of interest
dim_age	ages of interest
p_prop_3d	population proportion
P_tot_2d	population total
inc_v3d	incidence of vaccination
pop_moments_whole	aggregated population moments
vac_eff_arg	vaccine efficacy

Value

all statuses in R0 model for admin

mrc-ide/YFestimation documentation built on March 13, 2021, 1:40 p.m.