Description Usage Arguments Value
View source: R/R0_model_functions.R
function to calculate aggregated seroprevalence at survey in R0 model
1 2 3 | create_R0_lookup(dim_adm, dat, dim_year, dim_age, p_prop_3d, P_tot_2d,
inc_v3d, pop_moments_whole, pop_moments_agg, vac_eff_arg = 1,
granularity = "coarse")
|
dim_adm |
admin 1 units |
dat |
data on environment and occurrence |
dim_year |
years of interest |
dim_age |
ages of interest |
inc_v3d |
incidence of vacciantion |
pop_moments_whole |
popualtion moments |
pop_moments_agg |
aggregated population moments |
vac_eff_arg |
vaccine efficacy |
granularity |
how many intervals in R0 values, defaults to "coarse" |
p_at_survey_3d |
population proportion as an array |
P_tot_survey_2d |
population total |
vcfac_arg |
vaccine coverage factor, defaults to 1 |
file of R0 related to number of infections over the who time period
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