initial_params_trial: Initial conditions for the model trial where the entire...

In mrc-ide/gonovax: Deterministic Compartmental Model of Gonorrhoea with Vaccination

Initial conditions for the model trial where the entire cohort is in the high sexual activity group.

Description

Create initial conditions for the model trial

Usage

initial_params_trial(pars, n_vax = 1, p_v = 1, n_diag_rec = n_diag_rec)

Arguments

pars	A parameter list containing 'N0', and 'q' elements.
n_vax	an integer indicating the number of vaccine compartments
p_v	a vector of length 'n_vax' that sums to 1 denoting the proportion in each vaccine stratum
n_diag_rec	integer giving the number of each X, V(erlang), and W stratum, allowing tracking of diagnosis history. e.g for a n_diag_rec = 2 and erlang = 1, there will be X.I, X.II, V1.I, V1.II, W.I, W.II strata. Where '.I' corresponds to never-diagnosed individuals and '.II' is for individuals diagnosed at least once.

Value

A list of initial model states

mrc-ide/gonovax documentation built on Dec. 15, 2024, 11:02 a.m.