RunCombatMat: Function that runs the original Combat script where no model...
In mssm-msf-2019/BiostatsALL:
Description
Usage
Arguments
Examples
Description
It accepts an a matrix and gives back a matrix
Usage
1
RunCombatMat(eset, g)
Arguments
exprs:
matrix of expression
g:
factor defining the batches
#'
Examples
1
2
3
4
abatch=ReadAffy()
abatch$Batch<-sapply(protocolData(abatch)$ScanDate,function(x){substr(x,1,10)}
eset<-rma(abatch)
RunCombatMat(exprs(eset),eset$Batch)
mssm-msf-2019/BiostatsALL documentation built on May 22, 2019, 12:16 p.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Description Usage Arguments Examples
Description
It accepts an a matrix and gives back a matrix
Usage
1 | RunCombatMat(eset, g)
|
Arguments
exprs: |
matrix of expression |
g: |
factor defining the batches #' |
Examples
1 2 3 4 | abatch=ReadAffy()
abatch$Batch<-sapply(protocolData(abatch)$ScanDate,function(x){substr(x,1,10)}
eset<-rma(abatch)
RunCombatMat(exprs(eset),eset$Batch)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.