Description Usage Arguments Author(s) See Also
Read and combine tab deliminted htseq results files from a folder using the merge function.
1 2 | multMergeHTseq(mypath, pattern="*\\.htseq", byY="gene",
RegEx="(\\w+)\\.htseq\\.txt", Replace="\\1", sep="\t")
|
mypath |
Path to folder. |
pattern |
Unique pattern that matches files to be read and merged using Perl style regular expressions. |
byY |
Column name that should be used in the merge function. |
RegEx |
Perl style regular expression that matches pattern in the filename. Used to extract library name from filename. Example "(\\w+)\\.htseq\\.txt" matches Library1 in filename Library1.htseq.txt |
Replace |
Perl style replacement. Default = "\\1" |
sep |
The field separator character. |
Matthew Zinkgraf, Matthew.Zinkgraf@wwu.edu
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