Description Usage Arguments Value Examples
View source: R/findDataLocations.R
Find all plates using the following set of parameters:
1 2 3 |
pathogens |
Narrow down the results by selecting pathogens (exact, matches, ignoring case). |
experiments |
Name of the experiment to be considered (regular expression, case insensitive). |
plates |
A vector of regular expressions for plates. |
well.types |
A vector of regular expressions that is matched with the well.types column in well databases. |
contents |
This vector of strings/integers is matched against the three well database columns id.openBIS, id.infx and name via case insensitive regular expressions. In case it is specified, the next three parameters are ignored. |
id.openBIS |
A vector of regular expressions that is matched against the id.openBIS column. |
id.infx |
A vector of regular expressions that is matched against the id.infx column. |
name |
A vector of regular expressions that is matched against the name column. |
A list of PlateLocation objects.
1 2 3 | set1 <- findPlates(contents="MTOR", experiments="brucella-du-k")
set2 <- findPlates(contents=2475, experiments="brucella-au-k[1-3]")
set3 <- findPlates(contents="SCRAMBLED", experiments="brucella-du-k")
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