Global functions | |
---|---|
.onAttach | Source code |
.onLoad | Source code |
ImageData | Man page Source code |
MatData | Man page Source code |
PlateAggregate | Man page Source code |
PlateData | Man page Source code |
PlateLocation | Man page Source code |
PlateMetadata | Man page Source code |
WellData | Man page Source code |
WellLocation | Man page Source code |
WellMetadata | Man page Source code |
analyzeSeparation | Man page Source code |
augmentAggregate | Man page Source code |
augmentAggregate.PlateData | Source code |
augmentAggregate.WellData | Source code |
augmentAggregate.default | Source code |
augmentBscore | Man page Source code |
augmentBscore.PlateData | Source code |
augmentBscore.default | Source code |
augmentCordinateFeatures | Man page Source code |
augmentCordinateFeatures.ImageData | Source code |
augmentCordinateFeatures.PlateData | Source code |
augmentCordinateFeatures.WellData | Source code |
augmentCordinateFeatures.default | Source code |
augmentImageLocation | Man page Source code |
augmentImageLocation.ImageData | Source code |
augmentImageLocation.PlateData | Source code |
augmentImageLocation.WellData | Source code |
augmentImageLocation.default | Source code |
augmentMars | Man page Source code |
augmentMars.PlateData | Source code |
augmentMars.default | Source code |
buildPrototypeHelper | Source code |
checkCompletenessFeature | Man page Source code |
checkCompletenessFeature.Data | Source code |
checkCompletenessFeature.default | Source code |
checkCompletenessImage | Man page Source code |
checkCompletenessImage.PlateData | Source code |
checkCompletenessImage.WellData | Source code |
checkCompletenessImage.default | Source code |
checkCompletenessWell | Man page Source code |
checkCompletenessWell.PlateData | Source code |
checkCompletenessWell.default | Source code |
checkConsistency | Man page Source code |
checkConsistency.PlateData | Source code |
checkConsistency.WellData | Source code |
checkConsistency.default | Source code |
cleanData | Man page Source code |
cleanData.ImageData | Source code |
cleanData.PlateData | Source code |
cleanData.WellData | Source code |
cleanData.default | Source code |
compareModeltoTruth | Man page Source code |
configGet | Man page Source code |
configInit | Man page Source code |
configPathGet | Man page Source code |
configPathSet | Man page Source code |
configSet | Man page Source code |
convertToPlateLocation | Man page Source code |
convertToPlateLocation.Data | Source code |
convertToPlateLocation.DataLocation | Source code |
convertToPlateLocation.PlateAggregate | Source code |
convertToPlateLocation.default | Source code |
convertToWellLocation | Man page Source code |
convertToWellLocation.WellData | Source code |
convertToWellLocation.default | Source code |
deleteAllMetadataCaches | Man page Source code |
deleteAllWellCaches | Man page Source code |
dowloadFeatureHelper | Source code |
extractCells | Man page Source code |
extractCells.ImageData | Source code |
extractCells.PlateData | Source code |
extractCells.WellData | Source code |
extractCells.default | Source code |
extractFeatures | Man page Source code |
extractFeatures.ImageData | Source code |
extractFeatures.MatData | Source code |
extractFeatures.PlateData | Source code |
extractFeatures.WellData | Source code |
extractFeatures.default | Source code |
extractFeaturesMatchingHelper | Source code |
extractImages | Man page Source code |
extractImages.PlateData | Source code |
extractImages.WellData | Source code |
extractImages.default | Source code |
extractWells | Man page Source code |
extractWells.PlateData | Source code |
extractWells.default | Source code |
findFeatureHelper | Source code |
findPlates | Man page Source code |
findWells | Man page Source code |
getAllLocalPlates | Man page Source code |
getBarcode | Man page Source code |
getBarcode.DataLocation | Source code |
getBarcode.ImageData | Source code |
getBarcode.MatData | Source code |
getBarcode.PlateData | Source code |
getBarcode.WellData | Source code |
getBarcode.default | Source code |
getCacheFilenameData | Man page Source code |
getCacheFilenameData.PlateLocation | Source code |
getCacheFilenameData.WellLocation | Source code |
getCacheFilenameData.default | Source code |
getCacheFilenameMeta | Man page Source code |
getCacheFilenameMeta.DataLocation | Source code |
getCacheFilenameMeta.default | Source code |
getFeatureLocationInStructure | Source code |
getFeatureNames | Man page Source code |
getFeatureNames.ImageData | Source code |
getFeatureNames.MatData | Source code |
getFeatureNames.PlateData | Source code |
getFeatureNames.WellData | Source code |
getFeatureNames.default | Source code |
getImageStructure | Source code |
getLocalPath | Man page Source code |
getLocalPath.DataLocation | Source code |
getLocalPath.default | Source code |
getNoImgPerWell | Man page Source code |
getNoImgPerWell.ImageData | Source code |
getNoImgPerWell.MatData | Source code |
getNoImgPerWell.PlateData | Source code |
getNoImgPerWell.WellData | Source code |
getNoImgPerWell.default | Source code |
getNumCores | Man page Source code |
getOpenBisPath | Man page Source code |
getOpenBisPath.DataLocation | Source code |
getOpenBisPath.default | Source code |
getPathogen | Man page Source code |
getPathogen.DataLocation | Source code |
getPathogen.WellData | Source code |
getPathogen.WellMetadata | Source code |
getPathogen.default | Source code |
getSingleCellData | Man page Source code |
getWellIndex1D | Man page Source code |
getWellIndex2D | Man page Source code |
getWellName | Man page Source code |
getWellName.ImageData | Source code |
getWellName.WellData | Source code |
getWellName.WellLocation | Source code |
getWellName.default | Source code |
getWells | Source code |
glmBootstrapStability | Man page Source code |
makeFeatureCompatible | Man page Source code |
makeRankFull | Man page Source code |
meltData | Man page Source code |
meltData.ImageData | Source code |
meltData.PlateData | Source code |
meltData.WellData | Source code |
meltData.default | Source code |
moveFeatures | Man page Source code |
normalizeData | Man page Source code |
normalizeData.ImageData | Source code |
normalizeData.PlateData | Source code |
normalizeData.WellData | Source code |
normalizeData.default | Source code |
normalizeMoltenData | Man page Source code |
plateBoxplot | Man page Source code |
plateHeatmap | Man page Source code |
prepareDataforGlm | Man page Source code |
printPlateSet | Source code |
processContents | Source code |
processExperiments | Source code |
processPathogens | Source code |
processPlates | Source code |
processSingleCellDataPlate | Man page Source code |
processWellCols | Source code |
processWellNames | Source code |
processWellRows | Source code |
processWellTypes | Source code |
readMatFeatureHelper | Source code |
readRDSMC | Man page Source code |
rebuildAllMatDataCaches | Man page Source code |
rebuildCache | Man page Source code |
rebuildCache.MatData | Source code |
rebuildCache.default | Source code |
reloadSingleCellFeatures | Man page Source code |
saveRDSMC | Man page Source code |
saveToCache | Man page Source code |
saveToCache.MatData | Source code |
saveToCache.PlateAggregate | Source code |
saveToCache.WellData | Source code |
saveToCache.default | Source code |
size | Man page Source code |
updateDatabaseFeatures | Man page Source code |
updateDatabasePlate | Man page Source code |
updateDatabaseWells | Man page Source code |
wellDatabaseCoverage | Man page Source code |
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