Files in ncss-tech/aqp
Algorithms for Quantitative Pedology

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.travis.yml
DESCRIPTION
NAMESPACE
NEWS.md R/AAAA.R R/Class-SoilProfileCollection.R R/SPC-find_horizons.R R/SoilProfileCollection-coercion.R R/SoilProfileCollection-iterators.R R/SoilProfileCollection-methods.R R/SoilProfileCollection-slice-methods.R R/SoilProfileCollection-spatial.R R/accuracy_uncertainty.R R/addBracket.R R/addVolumeFraction.R R/aggregateColor.R R/aggregateSoilDepth.R R/checkHzDepthLogic.R R/checkSPC.R R/colorContrast.R R/colorContrastPlot.R R/colorQuantiles.R R/compositeSPC.R R/contrastChart.R R/contrastClass.R R/denormalize.R R/depthWeights.R R/estimatePSCS.R R/estimateSoilDepth.R R/evalGenHz.R R/evalMissingData.R R/explainPlotSPC.R R/f.noise.R R/genSlabLabels.R R/generalize.hz.R R/get.increase.matrix.R R/get.ml.hz.R R/getArgillicBounds.R R/getSoilDepthClass.R R/getSurfaceHorizonDepth.R R/glom.R R/glomApply.R R/groupedProfilePlot.R R/guessGenHzLevels.R R/huePosition.R R/hzTransitionProbabilities.R R/make.segments.R R/missingDataGrid.R R/mostLikelyHzSequence.R R/munsell2rgb.R R/mutate.R R/mutate_profile.R R/panel.depth_function.R R/plotMultipleSPC.R R/plotSPC.R R/plot_distance_graph.R R/prepanel.depth_function.R R/previewColors.R R/profile_compare.R R/random_profile.R R/rebuildSPC.R R/resample.twotheta.R R/setters.R R/sim.R R/sketch-utils.R R/sketch.R R/slab.R R/soilColorIndices.R R/soilColorSignature.R R/soilPalette.R R/split.R R/summarize.R R/tauW.R R/test_hz_logic.R R/texture-low-rv-high.R R/union.R R/unroll.R R/zzz.R README.md
data/ca630.rda
data/jacobs2000.rda
data/munsell.rda
data/rowley2019.rda
data/rruff.sample.rda
data/soil_minerals.rda
data/sp1.rda
data/sp2.rda
data/sp3.rda
data/sp4.rda
data/sp5.rda
data/sp6.rda
demo/00Index
demo/aqp.R demo/slope_effect_hz_thickness.R
docs/404.html
docs/authors.html
docs/docsearch.css
docs/docsearch.js
docs/index.html
docs/jquery.sticky-kit.min.js
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docs/news/index.html
docs/pkgdown.css
docs/pkgdown.js
docs/pkgdown.yml
docs/reference/SPC-plotting-1.png
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docs/reference/addVolumeFraction-1.png
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docs/reference/addVolumeFraction.html
docs/reference/aggregateColor.html
docs/reference/aggregateSoilDepth.html
docs/reference/amarillo.html
docs/reference/aqp-package.html
docs/reference/argillic.clay.increase.depth.html
docs/reference/barron.torrent.redness.LAB.html
docs/reference/brierScore.html
docs/reference/buntley.westin.index.html
docs/reference/ca630.html
docs/reference/checkHzDepthLogic.html
docs/reference/checkSPC.html
docs/reference/clod.hz.ids.html
docs/reference/colorContrast.html
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docs/reference/colorContrastPlot.html
docs/reference/colorQuantiles.html
docs/reference/confusionIndex.html
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docs/reference/contrastChart.html
docs/reference/contrastClass.html
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docs/reference/denormalize.html
docs/reference/estimatePSCS.html
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docs/reference/estimateSoilDepth.html
docs/reference/evalGenHZ.html
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docs/reference/fixOverlap.html
docs/reference/generalize.hz.html
docs/reference/get.increase.depths.html
docs/reference/get.increase.matrix.html
docs/reference/get.ml.hz.html
docs/reference/getArgillicBounds.html
docs/reference/getSoilDepthClass.html
docs/reference/getSurfaceHorizonDepth.html
docs/reference/glom.html
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docs/reference/guessGenHzLevels.html
docs/reference/harden.melanization.html
docs/reference/harden.rubification.html
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docs/reference/horizonColorIndices.html
docs/reference/huePosition.html
docs/reference/hurst.redness.html
docs/reference/hzDepthTests.html
docs/reference/hzDistinctnessCodeToOffset.html
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docs/reference/test_hz_logic.html
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docs/reference/unroll.html
inst/CITATION
inst/_pkgdown.yml
inst/example-data/jacobs2000-hz-data.csv
inst/example-data/jacobs2000-site-data.csv
man/SPC-plotting.Rd man/SPC-slab-methods.Rd man/SPC-slice-methods.Rd man/SPC-unique-methods.Rd man/SPC-utils.Rd man/SoilProfileCollection-class.Rd man/addBracket.Rd man/addVolumeFraction.Rd man/aggregateColor.Rd man/aggregateSoilDepth.Rd man/aqp-package.Rd man/argillic.clay.increase.depth.Rd man/barron.torrent.redness.LAB.Rd man/brierScore.Rd man/buntley.westin.index.Rd man/ca630.Rd man/checkHzDepthLogic.Rd man/checkSPC.Rd man/clod.hz.ids.Rd man/colorContrast.Rd man/colorContrastPlot.Rd man/colorQuantiles.Rd man/compositeSPC.Rd man/confusionIndex.Rd man/contrastChart.Rd man/contrastClass.Rd man/crit.clay.argillic.Rd man/denormalize.Rd man/depthWeights.Rd man/estimatePSCS.Rd man/estimateSoilDepth.Rd man/evalGenHZ.Rd man/evalMissingData.Rd man/f.noise.Rd man/filter.Rd man/fixOverlap.Rd man/generalize.hz.Rd man/get.increase.depths.Rd man/get.increase.matrix.Rd man/get.ml.hz.Rd man/getArgillicBounds.Rd man/getSoilDepthClass.Rd man/getSurfaceHorizonDepth.Rd man/glom.Rd man/glomApply.Rd man/grepSPC.Rd man/groupedProfilePlot.Rd man/guessGenHzLevels.Rd man/harden.melanization.Rd man/harden.rubification.Rd man/horizonColorIndices.Rd man/huePosition.Rd man/hurst.redness.Rd man/hzDepthTests.Rd man/hzDistinctnessCodeToOffset.Rd man/hzTransitionProbabilities.Rd man/jacobs2000.Rd man/missingDataGrid.Rd man/munsell.Rd man/munsell2rgb.Rd man/mutate.Rd man/mutate_profile.Rd man/panel.depth_function.Rd man/plotMultipleSPC.Rd man/plot_distance_graph.Rd man/previewColors.Rd man/profileApply-methods.Rd man/profileGroupLabels.Rd man/profile_compare-methods.Rd man/random_profile.Rd man/rebuildSPC.Rd man/resample.twotheta.Rd man/rowley2019.Rd man/rruff.sample.Rd man/shannonEntropy.Rd man/sim.Rd man/soilColorSignature.Rd man/soilPalette.Rd man/soil_minerals.Rd man/sp1.Rd man/sp2.Rd man/sp3.Rd man/sp4.Rd man/sp5.Rd man/sp6.Rd man/subApply.Rd man/subsetProfiles-methods.Rd man/summarize.Rd man/tauW.Rd man/texture.triangle.low.rv.high.Rd man/thompson.bell.darkness.Rd man/union.Rd man/unroll.Rd
misc/example-data/OSACA/OSACA-example_soil_data.csv
misc/example-data/OSACA/process_OSACA-data.R
misc/example-data/redox-jacobs-et-al-2000/hz.txt
misc/example-data/redox-jacobs-et-al-2000/process.R
misc/example-data/redox-jacobs-et-al-2000/site.txt
misc/example-data/rowley-et-al-2019/geochem.txt
misc/example-data/rowley-et-al-2019/hz.txt
misc/example-data/rowley-et-al-2019/min.txt
misc/example-data/rowley-et-al-2019/process.R
misc/example-data/sierra-transect/dahlgren-granitics.csv
misc/example-data/sierra-transect/processing.R
misc/example-data/sierra-transect/rasmussen-andisitic-lahar-site.csv
misc/example-data/sierra-transect/rasmussen-andisitic-lahar.csv
misc/example-data/sierra-transect/transect-GIS-data.csv
misc/sandbox/CIELAB-demonstration.R misc/sandbox/TX-ideas.R misc/sandbox/animate-OSD-colors-with-depth.R misc/sandbox/clarksville.R misc/sandbox/color-by-series.R misc/sandbox/color-distance-with-depth.R misc/sandbox/color-quantiles-L1-median.R misc/sandbox/color-spiral.R misc/sandbox/colordistance-leon-example.R misc/sandbox/dice.R misc/sandbox/font-test.R misc/sandbox/moist-to-dry-color-via-OSDs.R
misc/sandbox/morphologic-grid/examples/hv4-site.csv
misc/sandbox/morphologic-grid/examples/hv4-smu.csv
misc/sandbox/morphologic-grid/examples/hv4.tif
misc/sandbox/morphologic-grid/examples/hv4.tif.aux.xml
misc/sandbox/morphologic-grid/examples/hv4.tif.vat.cpg
misc/sandbox/morphologic-grid/examples/hv4.tif.vat.dbf
misc/sandbox/morphologic-grid/experiments.R misc/sandbox/mps-functions.R misc/sandbox/mps-vs-slab.R misc/sandbox/mps2-eval.R misc/sandbox/new-classes/accessors.r misc/sandbox/new-classes/benchmark-new-classes.r misc/sandbox/new-classes/classes-rebooted.r misc/sandbox/new-classes/coerce.r misc/sandbox/new-classes/init.r misc/sandbox/new-classes/overloads.r misc/sandbox/new-classes/setters.r misc/sandbox/new-classes/spatial.r misc/sandbox/new-classes/test-rebooted.r misc/sandbox/plot-single-SPC-notes.R misc/sandbox/slice-wise-entropy-example.R misc/sandbox/soil-colors-legos.R misc/sandbox/swatchplot-ideas.R misc/sandbox/test-aqp2.R
misc/sp5-old.rda
misc/test_suite/AQP-dylan-S4-hacking.R misc/test_suite/AQP_parallel.R misc/test_suite/aggregateColor-dev.R misc/test_suite/check_mean_sd_quantiles.R misc/test_suite/check_profile_compare.R misc/test_suite/compiler-benchmarking.R misc/test_suite/load-dummy-examples.R misc/test_suite/nasis-metadata-dev.R misc/test_suite/new_S4_examples.R
misc/test_suite/nssl/CA630-pedon.csv
misc/test_suite/nssl/CA630-site.csv
misc/test_suite/nssl/MLRA_18_22-lab_data.csv
misc/test_suite/nssl/ca630-CEC_and_Bases.csv
misc/test_suite/nssl/ca630-new.Rda
misc/test_suite/nssl/ca630.rda
misc/test_suite/nssl/ca630_b.dbf
misc/test_suite/nssl/ca630_b.prj
misc/test_suite/nssl/ca630_b.sbn
misc/test_suite/nssl/ca630_b.sbx
misc/test_suite/nssl/ca630_b.shp
misc/test_suite/nssl/ca630_b.shp.xml
misc/test_suite/nssl/ca630_b.shx
misc/test_suite/nssl/notes.R misc/test_suite/pcs_wt_mean_test.R misc/test_suite/profiling.R misc/test_suite/sda_soilweb_comparison.R misc/test_suite/slab-data.table-test.R misc/test_suite/slab-profiling.R misc/test_suite/slab2.R
misc/utils/Munsell/SpectralReflectancesOf2007MunsellBookOfColorGlossy.txt.gz
misc/utils/Munsell/add-neutral-hue.R misc/utils/Munsell/automatic_conversion.R misc/utils/Munsell/color_conversion_functions.R misc/utils/Munsell/interpolate_odd_chroma.R
misc/utils/Munsell/munsell-all.dat.gz
misc/utils/Munsell/munsell-reflectance-spectra.R misc/utils/Munsell/munsell.R
misc/utils/PMS/notes.txt
misc/utils/PMS/pantone-coated.csv
misc/utils/PMS/pantone-uncoated.csv
misc/utils/rebuild-aqp-soilDB-SPCs.R tests/testthat.R tests/testthat/test-SPC-objects.R tests/testthat/test-SPC-union.R tests/testthat/test-aggregateColor.R tests/testthat/test-argillic.R tests/testthat/test-checkHzDepthLogic.R tests/testthat/test-color-conversion.R tests/testthat/test-color-signature.R tests/testthat/test-colorContrast.R tests/testthat/test-colorIndices.R tests/testthat/test-denormalize.R tests/testthat/test-evalMissingData.R tests/testthat/test-genhz.R tests/testthat/test-glom.R tests/testthat/test-overlap.R tests/testthat/test-plotSPC.R tests/testthat/test-profileApply.R tests/testthat/test-profile_compare.R tests/testthat/test-pscs.R tests/testthat/test-sim.R tests/testthat/test-slab.R tests/testthat/test-slice.R tests/testthat/test-soil-depth.R tests/testthat/test-surface-thickness.R
ncss-tech/aqp documentation built on March 26, 2020, 2:40 a.m.