hist.rowTWanovaMatVec: Bum plot for rowTWanovaMatVec class

In nickytong/GenAnalysis: Genomic Analysis

Description

Bum plot for rowTWanovaMatVec class

Usage

## S3 method for class 'rowTWanovaMatVec'
hist(x, var = "pval_main",
  varLabel = "Treatment effect p value", main = NULL, plot = TRUE,
  return = FALSE, alphas = c(0.01, 0.05, 0.1, 0.2, 0.3, 0.4, 0.5),
  FDR = NULL, maskPthr = 1, pcutoff = 0.05)

Arguments

x	a rowTWanovaMatVec class (a data frame)
var	what variable (pval_main, pval_confounder, pval_interaction, anovaP|HCC1806, ...) for bum plot; if NULL, all are plotted
varLabel	label to be used for annotation purpose describing var
...	additional parameters to plotBumFDR

nickytong/GenAnalysis documentation built on July 20, 2019, 8:57 a.m.