rowanovaMatVec: ANOVA between rows of a matrix and a vector

Description Usage Arguments Value

Description

ANOVA between rows of a matrix and a vector

Usage

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rowanovaMatVec(mat, vec, matIsX = TRUE, levels = NULL, meta = list(tag =
  "ANOVA", row = "expression", response = "response"), base = 2,
  more = TRUE, addData = TRUE, ...)

Arguments

mat

a matrix, i.e. gene expression

vec

a vector of phenotype, categorical variable

levels

levels of the vec; when vec is not a factor, levels would be alphabetical order which will determine the scatter plot.

meta

meta information, a list. This can specify what type of analysis (i.e. RPPA correlated with EMT score); row, which represents what row variables are (rows of mat); response represents what does vec mean

Value

an object belonging to data frame and a class


nickytong/GenAnalysis documentation built on July 20, 2019, 8:57 a.m.