Run_diffreg: Given a list of correlation matrcies, return the SpQN...

In ningb/diffreg: Differential Regulation Analysis of miRNAs

Given a list of correlation matrcies, return the SpQN normalized matrices

Description

Given a list of correlation matrcies, return the SpQN normalized matrices

Usage

Run_diffreg(
  cor.list,
  target.mat,
  min.target.number = 5,
  direction = "Negative",
  alpha = 1
)

Arguments

cor.list	A list of correlation matrices with miRNA on columns and mRNA on rows
target.mat	A binary matrix indicating target with miRNA on columns and mRNA on rows
min.target.number	A integer indicating minimum number of targets requried for doing diffreg
direction	A character string specifying the direction of enrichment, must be "Negative" or "Positive"
alpha	Weight for running AD/KS test

Value

A data frame with ES and test results for each miRNA

ningb/diffreg documentation built on Jan. 20, 2025, 4:10 p.m.