dot-diffreg_ks: Run two-group differential enrichment using KS test #'

In ningb/diffreg: Differential Regulation Analysis of miRNAs

Run two-group differential enrichment using KS test #'

Description

Run two-group differential enrichment using KS test #'

Usage

.diffreg_ks(
  target.mat,
  cor.list,
  min.target.number = 5,
  direction = "Negative",
  alpha = NULL
)

Arguments

target.mat	A binary matrix indicating target with miRNA on columns and mRNA on rows
cor.list	A list of correlation matrices with miRNA on columns and mRNA on rows
min.target.number	A integer indicating minimum number of targets requried for doing diffreg
direction	A character string specifying the direction of enrichment, must be "Negative" or "Positive"
alpha	Weight for running AD/KS test

Value

A data frame with ES and test results for each miRNA

ningb/diffreg documentation built on Jan. 20, 2025, 4:10 p.m.