dot-Diff_by_Remove: Remove each gene in the gs and see what is the changes in the...

In ningb/diffreg: Differential Regulation Analysis of miRNAs

Remove each gene in the gs and see what is the changes in the dES

Description

Remove each gene in the gs and see what is the changes in the dES

Usage

.Diff_by_Remove(gs, main.rk, ref.rk, direction, n.iter, alpha)

Arguments

gs	A character vector for a set of targets. One element from output of GetLE().
main.rk	A numeric vector for all mRNAs ranked by correlation in the group of interest
ref.rk	A numeric vector for all mRNAs ranked by correlation in the group to compare with
direction	A character for the direction of enrichment
n.iter	An integer for the number of background to generate. Default is 500
alpha	A numeric value for the gsea param

Value

A numberic vector of the dES for removing each gene in gs

ningb/diffreg documentation built on Jan. 20, 2025, 4:10 p.m.