dot-Calc_NES_bkgd: Calculating background ES distribution for normalizing dES
In ningb/diffreg: Differential Regulation Analysis of miRNAs
.Calc_NES_bkgd R Documentation
Calculating background ES distribution for normalizing dES
Description
Calculating background ES distribution for normalizing dES
Usage
.Calc_NES_bkgd(gs, rk, direction, n.iter, alpha)
Arguments
gs
A string vector for set of targets of interests. Could be an element from output of GetLE()
rk
A numeric vector for all mRNAs ranked by correlation
direction
A character for the direction of enrichment
n.iter
An integer for the number of background to generate. Default is 500
alpha
A numeric value for the gsea param
Value
A numeric vector of background normalized ES distribution
ningb/diffreg documentation built on Jan. 20, 2025, 4:10 p.m.
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| .Calc_NES_bkgd | R Documentation |
Calculating background ES distribution for normalizing dES
Description
Calculating background ES distribution for normalizing dES
Usage
.Calc_NES_bkgd(gs, rk, direction, n.iter, alpha)
Arguments
gs |
A string vector for set of targets of interests. Could be an element from output of GetLE() |
rk |
A numeric vector for all mRNAs ranked by correlation |
direction |
A character for the direction of enrichment |
n.iter |
An integer for the number of background to generate. Default is 500 |
alpha |
A numeric value for the gsea param |
Value
A numeric vector of background normalized ES distribution
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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