Files in nkdailingyun/mineCETSA
Processing and Visualization of Proteome-wide MS-CETSA data
DESCRIPTION
Meta/vignette.rds
NAMESPACE
R/.DS_Store
R/NADPH_scaled.R
R/external_graphs.R
R/getName.R
R/ms_IDIT_QC.R
R/ms_IDIT_R2AUC.R
R/ms_ITDR_filter.R
R/ms_ITDR_fitting.R
R/ms_ITDR_ggplotting.R
R/ms_ITDR_rawread.R
R/ms_ITDR_scaling.R
R/ms_ITTR_filter.R
R/ms_ITTR_fitting.R
R/ms_ITTR_ggplotting.R
R/ms_ITTR_rawread.R
R/ms_ITTR_scaling.R
R/ms_clean_conditionrename.R
R/ms_composite.R
R/ms_dataaverage.R
R/ms_dircreate.R
R/ms_fileread_filewrite.R
R/ms_fitting.R
R/ms_forcescaling.R
R/ms_ggplotting.R
R/ms_ggplotting_errorbar.R
R/ms_ggplotting_rep.R
R/ms_innerread.R
R/ms_innerscale.R
R/ms_isoform_cleanup.R
R/ms_isothermal_bar_innerplot.R
R/ms_isothermal_line_innerplot.R
R/ms_isothermal_scaling.R
R/ms_legend.R
R/ms_melt_curve_summary.R
R/ms_melt_innerplot.R
R/ms_rawread.R
R/ms_scaling.R
R/ms_subsetting.R
R/ms_to_eSet.R
R/zzz2.R
README.md
data/.DS_Store
data/NADPH_scaled.rda
inst/.DS_Store
inst/doc/CETSA_ITDR_ITTR.R
inst/doc/CETSA_ITDR_ITTR.Rmd
inst/doc/CETSA_ITDR_ITTR.html
inst/doc/CETSA_melt_curve.R
inst/doc/CETSA_melt_curve.Rmd
inst/doc/CETSA_melt_curve.html
inst/extdata/PfITDR/HbDep_inparasite_ITDR_37_Quinine_Pf.txt
inst/extdata/PfITDR/HbDep_inparasite_ITDR_51_Quinine_R1_Pf.txt
inst/extdata/PfITDR/HbDep_inparasite_ITDR_51_Quinine_R2_Pf.txt
inst/extdata/PfITDR/HbDep_inparasite_ITDR_57_Quinine_R1_Pf.txt
inst/extdata/PfITDR/HbDep_inparasite_ITDR_57_Quinine_R2_Pf.txt
inst/extdata/PfMeltCurve/Meltcurve_DMSO_Rep1_Pf_Proteins.txt
inst/extdata/PfMeltCurve/Meltcurve_DMSO_Rep2_Pf_Proteins.txt
inst/extdata/PfMeltCurve/Meltcurve_Pyrimethamine100uM_Rep1_Pf_Proteins.txt
inst/extdata/PfMeltCurve/Meltcurve_Pyrimethamine100uM_Rep2_Pf_Proteins.txt
man/.DS_Store
man/NADPH_scaled.Rd
man/calEDscore.Rd
man/external_graphs.Rd
man/getGeneName.Rd
man/ms_IDIT_QC.Rd
man/ms_IDIT_R2AUC.Rd
man/ms_ITDR_filter.Rd
man/ms_ITDR_fitting.Rd
man/ms_ITDR_ggplotting.Rd
man/ms_ITDR_rawread.Rd
man/ms_ITDR_scaling.Rd
man/ms_ITTR_filter.Rd
man/ms_ITTR_fitting.Rd
man/ms_ITTR_ggplotting.Rd
man/ms_ITTR_rawread.Rd
man/ms_ITTR_scaling.Rd
man/ms_clean.Rd
man/ms_complex_melt_innerplot.Rd
man/ms_composite_ID_Gene.Rd
man/ms_composite_ID_Gene_Protein.Rd
man/ms_composite_ID_Protein.Rd
man/ms_conditionrename.Rd
man/ms_data_average.Rd
man/ms_dircreate.Rd
man/ms_directory.Rd
man/ms_eSet_to_df.Rd
man/ms_fileread.Rd
man/ms_filewrite.Rd
man/ms_find_replicate.Rd
man/ms_fitting.Rd
man/ms_forcescaling.Rd
man/ms_getGene.Rd
man/ms_ggplotting.Rd
man/ms_ggplotting_errorbar.Rd
man/ms_ggplotting_rep.Rd
man/ms_innerplotbox.Rd
man/ms_innerplotmedian.Rd
man/ms_innerread.Rd
man/ms_innerscale.Rd
man/ms_isoform_consolidate.Rd
man/ms_isoform_match.Rd
man/ms_isoform_resolve.Rd
man/ms_isothermal_bar_innerplot.Rd
man/ms_isothermal_legend.Rd
man/ms_isothermal_legend2.Rd
man/ms_isothermal_line_innerplot.Rd
man/ms_isothermal_scaling.Rd
man/ms_melt_curve_summary.Rd
man/ms_melt_innerplot.Rd
man/ms_melt_legend.Rd
man/ms_rawread.Rd
man/ms_remove_outlier_replicate.Rd
man/ms_reproducible_replicate.Rd
man/ms_scaling.Rd
man/ms_select_goodmeltcurve.Rd
man/ms_subsetting.Rd
man/ms_to_eSet.Rd
mineCETSA.Rproj
vignettes/.DS_Store
vignettes/CETSA_ITDR_ITTR.R
vignettes/CETSA_ITDR_ITTR.Rmd
vignettes/CETSA_ITDR_ITTR.html
vignettes/CETSA_melt_curve.R
vignettes/CETSA_melt_curve.Rmd
vignettes/CETSA_melt_curve.html
vignettes/preset_colorpanel2.png
