colData: Column data for 'TimeSeriesExperiment'

In nlhuong/vistimeseq: Analysis for short time-series data

Description

colData() slots holds information on individual samples including corresponding sample name in column 'sample' as well as time, group and replicate.

Usage

## S4 replacement method for signature 'TimeSeriesExperiment,ANY'
colData(x, ...) <- value

Arguments

x	a TimeSeriesExperiment object
...	argiments to other functions.
value	a DataFrame with new sample information

Details

The setter also updates the information in timepoint, replicate and group slots and resets the time-series analysis results to NULL.

Value

a S4Vectors::DataFrame

Examples

data("endoderm_small")
head(colData(endoderm_small))
newdf <- colData(endoderm_small)
newdf$random <- sample(ncol(endoderm_small), ncol(endoderm_small))
colData(endoderm_small) <- newdf
head(colData(endoderm_small))

nlhuong/vistimeseq documentation built on Sept. 4, 2021, 2:41 a.m.