plotTimeSeriesClusters: Plot (time) series over clusters.

In nlhuong/vistimeseq: Analysis for short time-series data

Description

Plots timecourse (aggregated over replicates) feature data faceted by computed clusters and experimental group.

Usage

plotTimeSeriesClusters(
  object,
  features = NULL,
  transparency = 0.5,
  ncol = 4,
  scales = "free"
)

Arguments

object	A TimeSeriesExperiment object.
features	A vector of names of selected features to plot.
transparency	transparency of trajectory lines.
ncol	number of columns in the factet plot.
scales	character scalar indecating facet scales, by default "free".

Value

ggplot object

Examples

data("endoderm_small")
endoderm_small <- clusterTimeSeries(endoderm_small)
plotTimeSeriesClusters(endoderm_small)

nlhuong/vistimeseq documentation built on Sept. 4, 2021, 2:41 a.m.