dimensionReduction: Dimension reduction results
In nlhuong/vistimeseq: Analysis for short time-series data
Description
Usage
Arguments
Value
Examples
Description
Getter methods for dimensionReduction slot
of a TimeSeriesExperiment object. The slot is a list of
data.frames: 'pca_sample', 'pca_feature' and 'pca_eigs' storing
results from a PCA projection.
Usage
1
2
3
4
dimensionReduction(object, ...)
## S4 method for signature 'TimeSeriesExperiment'
dimensionReduction(object, name = NULL)
Arguments
object
a TimeSeriesExperiment object.
...
argiments to other functions.
name
one of elements of 'dimensionReduction' slot: 'pca_sample',
'pca_feature' and 'pca_eigs' for returning the entire list. If NULL,
all elements are returned.
Value
a data.frame or a list of data.frames
Examples
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data("endoderm_small")
endoderm_small <- runPCA(endoderm_small)
head(dimensionReduction(endoderm_small, "pca_sample")[, 1:3])
nlhuong/vistimeseq documentation built on Sept. 4, 2021, 2:41 a.m.
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Description Usage Arguments Value Examples
Description
Getter methods for dimensionReduction slot
of a TimeSeriesExperiment object. The slot is a list of
data.frames: 'pca_sample', 'pca_feature' and 'pca_eigs' storing
results from a PCA projection.
Usage
1 2 3 4 | dimensionReduction(object, ...)
## S4 method for signature 'TimeSeriesExperiment'
dimensionReduction(object, name = NULL)
|
Arguments
object |
a |
... |
argiments to other functions. |
name |
one of elements of 'dimensionReduction' slot: 'pca_sample', 'pca_feature' and 'pca_eigs' for returning the entire list. If NULL, all elements are returned. |
Value
a data.frame or a list of data.frames
Examples
1 2 3 | data("endoderm_small")
endoderm_small <- runPCA(endoderm_small)
head(dimensionReduction(endoderm_small, "pca_sample")[, 1:3])
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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