API for nspope/r2vcftools
An R interface for vcftools
| Global functions | |
|---|---|
| .TajimaD | Source code |
| .checkDependencies | Source code |
| .getRowIds | Source code |
| .get_stats | Source code |
| .setRowIds | Source code |
| .sim_afs | Source code |
| .sim_stats | Source code |
| .taj_d | Source code |
| .taj_d_vcftools | Source code |
| Apvals | Source code |
| Best.run | Source code |
| CI | Source code |
| Chrom | Man page |
| Chrom,vcfLink-method | Man page |
| Clean | Man page |
| Clean,vcfLink-method | Man page |
| Copy | Man page |
| Copy,vcfLink-method | Man page |
| Filter | Man page |
| Filter,vcfLink-method | Man page |
| Fstats | Man page |
| Fstats,vcfLink-method | Man page |
| GIF | Source code |
| GenDiv | Source code |
| Geno | Man page |
| Geno,vcfLink-method | Man page |
| GenotypeMatrix | Man page |
| GenotypeMatrix,vcfLink-method | Man page |
| Lfmm | Man page |
| Lfmm,vcfLink-method | Man page |
| LfmmEnv | Man page |
| LfmmEnv,vcfLink-method | Man page |
| Linkage | Man page |
| Linkage,vcfLink-method | Man page |
| LoadMeta | Man page |
| LoadMeta,vcfLink-method | Man page |
| ManPlot | Source code |
| Plink | Man page |
| Plink,vcfLink-method | Man page |
| Query | Man page |
| Query,vcfLink-method | Man page |
| Relatedness | Man page |
| Relatedness,vcfLink-method | Man page |
| Save | Man page |
| Save,vcfLink-method | Man page |
| Subset | Man page |
| Subset,vcfLink-method | Man page |
| TajimaD | Man page Source code |
| UpdateLink | Man page |
| UpdateLink,vcfLink-method | Man page |
| VCFsummary | Source code |
| candidates | Source code |
| filterOptions | Man page Source code |
| fst | Source code |
| linkageOptions | Man page Source code |
| tempfile_vcfLink | Source code |
| vcfLink | Man page Source code |
| vcfLink-class | Man page |
