Plink: Convert VCF to Plink

In nspope/r2vcftools: An R interface for vcftools

Description

Given a "vcfLink" object, converts the VCF file to Plink format and returns the locations of the .ped and .map files.

Usage

Plink(object, ...)

## S4 method for signature 'vcfLink'
Plink(object, output.prefix = NULL, verbose = TRUE)

Arguments

object	an object of class "vcfLink"
output.prefix	the prefix to use for output files
verbose	print stdout from vcftools?

nspope/r2vcftools documentation built on Oct. 10, 2019, 2:06 a.m.