Relatedness: Relatedness calculation from VCF file

Description Usage Arguments

Description

Given a "vcfLink" object, returns a data frame containing pairwise relatedness coefficients between samples.

Usage

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Relatedness(object, ...)

## S4 method for signature 'vcfLink'
Relatedness(object, type = c("yang", "manichaikul"),
  verbose = TRUE)

Arguments

object

an object of class "vcfLink"

type

the type of relatedness coefficient to return; see vcftools manual

verbose

print stdout from vcftools?


nspope/r2vcftools documentation built on Oct. 10, 2019, 2:06 a.m.