vcfLink: Create a vcfLink object
In nspope/r2vcftools: An R interface for vcftools
Description
Creates an object of class vcfLink, which acts as an interface to a temporary VCF file. Also loads metadata (if present) associated with the samples.
Usage
1
Arguments
vcf_path
Character, the path to a VCF file
meta
Character, the path to a csv containing metadata associated with each sample
overwriteID
Boolean, overwrite SNP ids with numbers? Only set to TRUE if the VCF file does not already contain SNP ids
nspope/r2vcftools documentation built on Oct. 10, 2019, 2:06 a.m.
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Description
Creates an object of class vcfLink, which acts as an interface to a temporary VCF file. Also loads metadata (if present) associated with the samples.
Usage
1 |
Arguments
vcf_path |
Character, the path to a VCF file |
meta |
Character, the path to a csv containing metadata associated with each sample |
overwriteID |
Boolean, overwrite SNP ids with numbers? Only set to TRUE if the VCF file does not already contain SNP ids |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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