getForMigtable: Getting the Forward Migration
In ocbe-uio/cellmigRation: Track Cells, Analyze Cell Trajectories and Compute Migration Statistics
Description
Usage
Arguments
Value
Author(s)
References
Examples
View source: R/all_functions_v8.R
Description
The ForwardMigration function automatically generates
data and plots for forward persistence and speed.
Usage
1
getForMigtable(object)
Arguments
object
CellMig class object, which is a list of
data frames resulted from the PreProcessing.
Value
A data frame inclusing values of the forward migration
analysis.
Author(s)
Salim Ghannoum salim.ghannoum@medisin.uio.no
References
https://www.data-pulse.com/dev_site/cellmigration/
Examples
1
2
3
4
5
6
7
8
data(WSADataset)
wsaDF <- WSADataset[seq(1,300,by=1),]
wsaTD <- CellMig(wsaDF)
wsaTD <- wsaPreProcessing(wsaTD,FrameN=55)
wsaTD <-ForwardMigration(wsaTD, TimeInterval=10, sfptPLOT=FALSE,
afptPLOT= FALSE, sfpPLOT= FALSE,
afpPLOT= FALSE, export=FALSE)
head(getForMigtable(wsaTD))
ocbe-uio/cellmigRation documentation built on Dec. 16, 2021, 10:59 p.m.
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Description Usage Arguments Value Author(s) References Examples
View source: R/all_functions_v8.R
Description
The ForwardMigration function automatically generates data and plots for forward persistence and speed.
Usage
1 | getForMigtable(object)
|
Arguments
object |
|
Value
A data frame inclusing values of the forward migration analysis.
Author(s)
Salim Ghannoum salim.ghannoum@medisin.uio.no
References
https://www.data-pulse.com/dev_site/cellmigration/
Examples
1 2 3 4 5 6 7 8 | data(WSADataset)
wsaDF <- WSADataset[seq(1,300,by=1),]
wsaTD <- CellMig(wsaDF)
wsaTD <- wsaPreProcessing(wsaTD,FrameN=55)
wsaTD <-ForwardMigration(wsaTD, TimeInterval=10, sfptPLOT=FALSE,
afptPLOT= FALSE, sfpPLOT= FALSE,
afpPLOT= FALSE, export=FALSE)
head(getForMigtable(wsaTD))
|
R Package Documentation
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We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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