mut.type.somatic: mut.type.somatic
In omicsCore/SEQprocess: SEQprocess : a modularized and customizable pipeline framework for NGS processing in R package.
Description
Usage
Arguments
Details
Value
Description
Write mutation type
Usage
1
mut.type.somatic(df, ref="Ref",alt="Alt")
Arguments
df
data frame from get.annovar.report()
ref
column name of the reference (default="Ref")
alt
column name of the alteration (default="Alt")
Details
In the data frame, enter the mutation type using reference and alteration
Value
data frame with mutation type
omicsCore/SEQprocess documentation built on May 7, 2020, 4:18 a.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Description Usage Arguments Details Value
Description
Write mutation type
Usage
1 | mut.type.somatic(df, ref="Ref",alt="Alt")
|
Arguments
df |
data frame from get.annovar.report() |
ref |
column name of the reference (default="Ref") |
alt |
column name of the alteration (default="Alt") |
Details
In the data frame, enter the mutation type using reference and alteration
Value
data frame with mutation type
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.