LinkageGroupList: A class for storing linkage group calls for contigs

In oneillkza/ContiBAIT: Improves Early Build Genome Assemblies using Strand-Seq Data

Description

This class is simply a list of character strings containing the names of linkage groups.

Usage

LinkageGroupList(linkageGroups = list(), names = character())

Arguments

linkageGroups	a list of character vectors of names of contigs in each LG
names	a vector of names of linkage groups

Value

a LinkageGroupList

Examples

lgList <- LinkageGroupList(list(lg1=c('contig1', 'contig2'), lg2=c('contig3')),
								names=c('lg1', 'lg20'))

oneillkza/ContiBAIT documentation built on June 1, 2020, 5:49 a.m.