oneillkza/ContiBAIT: Improves Early Build Genome Assemblies using Strand-Seq Data
Using strand inheritance data from multiple single cells from the organism whose genome is to be assembled, contiBAIT can cluster unbridged contigs together into putative chromosomes, and order the contigs within those chromosomes.
Getting started
Browse package contents
Package details |
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| Author | Kieran O'Neill, Mark Hills, Mike Gottlieb |
| Bioconductor views | CellBasedAssays Genetics GenomeAssembly ImmunoOncology QualityControl WholeGenome |
| Maintainer | Kieran O'Neill <koneill@bccrc.ca> |
| License | BSD_2_clause + file LICENSE |
| Version | 1.17.0 |
| Package repository | View on GitHub |
| Installation |
Install the latest version of this package by entering the following in R:
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