inst/examples/makeChrTable.R
In oneillkza/ContiBAIT: Improves Early Build Genome Assemblies using Strand-Seq Data
#Get an example BAM file and generate a chromosome table featuring fragment names and lengths
example.bam <- list.files(file.path(system.file(package='contiBAIT'), 'extdata'), full.names=TRUE)[1]
chrTable <- makeChrTable(example.bam)
show(chrTable)
dividedChr <- makeChrTable(example.bam, splitBy=1000000)
show(dividedChr)
oneillkza/ContiBAIT documentation built on June 1, 2020, 5:49 a.m.
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#Get an example BAM file and generate a chromosome table featuring fragment names and lengths
example.bam <- list.files(file.path(system.file(package='contiBAIT'), 'extdata'), full.names=TRUE)[1]
chrTable <- makeChrTable(example.bam)
show(chrTable)
dividedChr <- makeChrTable(example.bam, splitBy=1000000)
show(dividedChr)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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