inst/examples/thoroughBed.R
In oneillkza/ContiBAIT: Improves Early Build Genome Assemblies using Strand-Seq Data
#Get a list of BAM files containing libraries for cells from the same organism, aligned to the same genome
#In this case these are the example BAM files provided with the package (hence the call to system.file);
data("exampleLibList")
library(BiocParallel)
example.dir <- file.path(system.file(package='contiBAIT'), 'extdata')
exampleRange <- thoroughBed(example.dir, exampleLibList)
show(exampleRange)
oneillkza/ContiBAIT documentation built on June 1, 2020, 5:49 a.m.
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#Get a list of BAM files containing libraries for cells from the same organism, aligned to the same genome
#In this case these are the example BAM files provided with the package (hence the call to system.file);
data("exampleLibList")
library(BiocParallel)
example.dir <- file.path(system.file(package='contiBAIT'), 'extdata')
exampleRange <- thoroughBed(example.dir, exampleLibList)
show(exampleRange)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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