mutrank.wrap: Mutual Rank wrapper function

In paubellot/netbenchmark: Benchmarking of several gene network inference methods

Description

A wrapper function for mutual rank.

Usage

    mutrank.wrap(data)

Arguments

data	Numeric matrix with the microarray dataset to infer the network. Columns contain variables and rows contain samples.

Value

mutrank.wrap returns a matrix which is the weighted adjacency matrix of the network inferred by Mutual Rank algorithm.

References

Obayashi, Takeshi, and Kengo Kinoshita. "Rank of correlation coefficient as a comparable measure for biological significance of gene coexpression." DNA research 16.5 (2009): 249-260.

Examples

     # Data
    data <- grndata::getData(datasource.name = "toy",FALSE)
    # Inference
    net <- mutrank.wrap(data)

paubellot/netbenchmark documentation built on May 24, 2020, 1:16 a.m.