create_sce_from_counts: Create SingleCellExperiment object from count data

In pengminshi/MRtree: Multi-resolution Reconciled Tree

Create SingleCellExperiment object from count data

Description

Create SingleCellExperiment object from count data

Usage

create_sce_from_counts(counts, col.data, row.data = NULL, scale.factor = 10000)

Arguments

counts	gene-by-cell count matrix
col.data	a dataframe containing cell informations
row.data	a dataframe containing gene informations
scale.factor	scalar used for per cell sum of count normalization

Value

a SingleCellExperiment object

pengminshi/MRtree documentation built on March 6, 2023, 4:20 p.m.