get_similarity_from_tree: Calculate the pairwise similarity matrix between samples,...
In pengminshi/MRtree: Multi-resolution Reconciled Tree
View source: R/evaluation_functions.R
get_similarity_from_tree R Documentation
Calculate the pairwise similarity matrix between samples, from sample labels
and a phylo tree of labels.
Description
Calculate the pairwise similarity matrix between samples, from sample labels
and a phylo tree of labels.
Usage
get_similarity_from_tree(tree, labels)
Arguments
tree
a phylo object giving the tree structure of labels
labels
a label vector for n samples
Value
a n-by-n similarity matrix showing the similarity between samples
given the labels and the tree structure of labels
pengminshi/MRtree documentation built on March 6, 2023, 4:20 p.m.
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View source: R/evaluation_functions.R
| get_similarity_from_tree | R Documentation |
Calculate the pairwise similarity matrix between samples, from sample labels and a phylo tree of labels.
Description
Calculate the pairwise similarity matrix between samples, from sample labels and a phylo tree of labels.
Usage
get_similarity_from_tree(tree, labels)
Arguments
tree |
a phylo object giving the tree structure of labels |
labels |
a label vector for n samples |
Value
a n-by-n similarity matrix showing the similarity between samples given the labels and the tree structure of labels
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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