plot_clustree: Plot MRtree results as a dendrogram. If reference labels are...

In pengminshi/MRtree: Multi-resolution Reconciled Tree

Plot MRtree results as a dendrogram. If reference labels are provided, a pie chart is shown at each tree node, detailing the label proprotions.

Description

Plot MRtree results as a dendrogram. If reference labels are provided, a pie chart is shown at each tree node, detailing the label proprotions.

Usage

plot_clustree(labelmat, prefix = NULL, ref.labels = NULL, plot.ref = TRUE, ...)

Arguments

labelmat	clustering results saved in a label matrix n-by-number of partitions
prefix	string indicating columns containing clustering information
ref.labels	reference labels to be shown at each tree node
plot.ref	boolean wheather to color the tree node by the major type
...	other parameter to pass to clustree function according to reference labels

Examples

plot_clustree(labelmat = clust_example$clusterings, ref.labels = clust_example$ref.labels)

pengminshi/MRtree documentation built on March 6, 2023, 4:20 p.m.