The output from JPP (Rosenberger, Bludau et al. 2017) has not anymore the m_score column but an ProteinName_m_score and transition_group_id_m_score. To make the users aware this function tests if the m_score column still exists and selects as default the transition_group_id_m_score column.
Data table that is produced by the OpenSWATH/pyProphet workflow
Defines the column from which to retrieve the m_score. If you use JPP (Rosenberger, Bludau et al. 2017) this can be used to select between Protein and transition_group m_score.
Returns the mscore_col that might have been changed to transition_group_id_m_score and gives a message to the user.
1 2 3 4
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.