gen_error_profile: Generates a read error profile

In philliplab/MotifBinner: Bin reads by Motif

Description

Generates a read error profile

Usage

gen_error_profile(technique = "uniform", params = list(read_len = 1000,
  A_err_rates = list(A = 0.997, C = 0.001, G = 0.001, T = 0.001), C_err_rates =
  list(C = 0.997, A = 0.001, G = 0.001, T = 0.001), G_err_rates = list(G =
  0.997, C = 0.001, A = 0.001, T = 0.001), T_err_rates = list(T = 0.997, C =
  0.001, G = 0.001, A = 0.001)))

Arguments

technique	What technique should be used to generate the error profile?
params	A list of parameters to pass to the specific profile generator

philliplab/MotifBinner documentation built on Sept. 2, 2020, 11:41 a.m.