GFF_split_into_scaffolds: Split a GFF file into multiple scaffold-GFFs

In pievos101/PopGenome: An Efficient Swiss Army Knife for Population Genomic Analyses

Split a GFF file into multiple scaffold-GFFs

Description

This function splits a GFF file into multiple GFFs including data for exactly one scaffold each.

Usage

GFF_split_into_scaffolds(GFF.file, output.folder)

Arguments

GFF.file	the basepath of the GFF file
output.folder	name of the folder where the GFFs should be stored

Details

The algorithm splits the GFF into multiple scaffold based GFFs and
stores the files in a given folder. This folder can be used as an input for readData(,gffpath="")

Value

TRUE

Examples

# GFF_split_into_scaffolds("GFFfile.gff","scaffoldGFFs")
# test <- readData("scaffoldVCFs", format="VCF", gffpath="scaffoldGFFs")

pievos101/PopGenome documentation built on Feb. 24, 2023, 7:11 a.m.