set.ref.positions-methods | R Documentation |
This generic function sets the positions of the SNP data. Should be used if you use alignment formats to store SNP data (i.e., data restricted to the polymorphic positions).
## S4 method for signature 'GENOME' set.ref.positions(object, positions)
object |
an object of class |
positions |
a list of reference positions |
returned value is a modified object of class "GENOME"
# GENOME.class <- readData("\home\Alignments") # GENOME.class # GENOME.class <- set.ref.positions(GENOME.class,list(c(1000,2001,3000), # c(3200,12000)))
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