fhDoCV: Calculate CVs from a 'FlowHist' object

In plantarum/flowPloidy: Analyze flow cytometer data to determine sample ploidy

Calculate CVs from a FlowHist object

Description

Extracts the model parameters (G1 peak means and standard deviations) and calculates the CVs. It also calculates the standard errors for the peak ratios.

Usage

fhDoCV(fh)

Arguments

fh	a FlowHist object

Details

Note that the standard errors here are in fact the SE for the model fit to the particular data set, NOT the SE for the DNA content ratio. In other words, it's a measure of how well the model has fit the data, not a measure of confidence in the actual amount of DNA in the original samples. It's almost always very small, even with very noisy data.

Value

The updated FlowHist object.

Author(s)

Tyler Smith

See Also

deltaMethod, fhDoCounts, fhDoNLS, fhDoRCS.

plantarum/flowPloidy documentation built on March 25, 2023, 1:37 a.m.